IGIPI - Integrating Gene Interactions with Protein Interactions on the Semantic Web

IGIPI Integrating Gene Interactions with Protein Interactions on the Semantic Web

OWL specification for Timegoal Interdependency Graphs (TIGs)
Biomedical condition TIGs
Biological function TIGs
Observation timegoals

Examples of website semantic annotations
Visual examples of TIGs

Integration of GeneOntology, MGED Ontology, UMLS
Root timegoals for biological function TIGs (from GeneOntology) Root timegoals for biomedical condition TIGs (from UMLS)
Ontology for Gene expression study timegoal (from MGED) Ontology for Two hybrid study timegoal Ontology for Synthetic mutant lethality study timegoal

References

Integrating Gene Interaction with Protein Interactions and Other Biomedical Knowledge on the Semantic Web (submitted).
Bill Andreopoulos. The IGIPI Ontological Framework: Towards Integrating Gene Interactions with Protein Interactions. Technical report CS-2001-07. York University, Department of Computer Science and Engineering. December 2001.

Website online since September 10, 2005. Last updated: September 27, 2005